Transcript: lnc-ZC3H11B-1:1

Basic information

LNCipedia transcript ID: lnc-ZC3H11B-1:1 
LNCipedia gene ID: lnc-ZC3H11B-1
RefSeq ID: NR_135822
Location (hg38): chr1:219435158-219557324
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 687 bp
Exons: 4
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_135822.1
Alternative gene names: LOC102723886


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -106.4962 non-coding 
CPAT coding probability 39.52% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ZC3H11B-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-LEFTY2-89:1
5.1 lnc-LEFTY2-89:1
5.2 lnc-ZC3H11B-1:1