Transcript: lnc-ZC3H11B-1:16

Basic information

LNCipedia transcript ID: lnc-ZC3H11B-1:16 
LNCipedia gene ID: lnc-ZC3H11B-1
Location (hg38): chr1:219435259-219437403
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 503 bp
Exons: 2
Sources: Broad Institute
Alternative transcript names: TCONS_00001828
Alternative gene names: XLOC_001209; linc-GPATCH2-8


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -129.9961 non-coding 
CPAT coding probability 2.82% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZC3H11B-1:16 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-SLC30A10-1:2
3.1 lnc-SLC30A10-1:2
4.0 lnc-SLC30A10-1:2
4.1 lnc-SLC30A10-1:2
5.0 lnc-SLC30A10-1:2
5.1 lnc-LEFTY2-89:16
5.2 lnc-ZC3H11B-1:16