Transcript: lnc-ZC3H11B-1:2

Basic information

LNCipedia transcript ID: lnc-ZC3H11B-1:2 
LNCipedia gene ID: lnc-ZC3H11B-1
Location (hg38): chr1:219401596-219557320
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 12132 bp
Exons: 9
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000230024.1|MICT00000030683.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 44.3004 non-coding 
CPAT coding probability 6.45% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ZC3H11B-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SLC30A10-1:6
5.0 lnc-SLC30A10-1:6
5.1 lnc-LEFTY2-89:2
5.2 lnc-ZC3H11B-1:2