Transcript: lnc-ZC3H12B-18:3

Basic information

LNCipedia transcript ID: lnc-ZC3H12B-18:3 
LNCipedia gene ID: lnc-ZC3H12B-18
Location (hg38): chrX:65075853-65113846
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 243 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00017188; NONHSAT137329
Alternative gene names: XLOC_008000; linc-ZC3H12B-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 11.8434 non-coding 
CPAT coding probability 3.89% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZC3H12B-18:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ZC3H12B-2:2
3.1 lnc-ZC3H12B-2:2
4.0 lnc-ZC3H12B-18:3
4.1 lnc-ZC3H12B-18:3
5.0 lnc-ZC3H12B-18:3
5.1 lnc-CXorf49B-68:3
5.2 lnc-ZC3H12B-18:3