Transcript: lnc-ZCCHC7-2:23

Basic information

LNCipedia transcript ID: lnc-ZCCHC7-2:23 
LNCipedia gene ID: lnc-ZCCHC7-2
Location (hg38): chr9:37079917-37130512
Strand: +
Class: sense-overlapping
Sequence Ontology term: sense_overlap_ncRNA
Transcript size: 1919 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000233137.2|HBMT00001462117.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 14.6 non-coding 
CPAT coding probability 1.98% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZCCHC7-2:23 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ZCCHC7-2:23
5.0 lnc-ZCCHC7-2:23
5.1 lnc-GRHPR-11:18
5.2 lnc-ZCCHC7-2:23