Transcript: lnc-ZDBF2-2:6

Basic information

LNCipedia transcript ID: lnc-ZDBF2-2:6 
LNCipedia gene ID: lnc-ZDBF2-2
Ensembl Gene ID: ENSG00000279220
Ensembl Transcript ID: ENST00000623040
Location (hg38): chr2:206203376-206265326
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2791 bp
Exons: 6
Sources: Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000623040.2
Alternative gene names: ENSG00000279220.2; AC007383.4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 60.9355 coding 
CPAT coding probability 0.37% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ZDBF2-2:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-NOP58-52:2
5.1 lnc-NOP58-52:2
5.2 lnc-ZDBF2-2:6