Transcript: lnc-ZDHHC17-12:1

Basic information

LNCipedia transcript ID: lnc-ZDHHC17-12:1 
LNCipedia gene ID: lnc-ZDHHC17-12
Location (hg38): chr12:76571317-76571817
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 501 bp
Exons: 1
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT029581; FPKM1_group_6614_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -196.1259 non-coding 
CPAT coding probability 2.28% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZDHHC17-12:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZDHHC17-12:1
4.0 lnc-ZDHHC17-12:1
4.1 lnc-ZDHHC17-12:1
5.0 lnc-ZDHHC17-12:1
5.1 lnc-SYT1-31:1
5.2 lnc-ZDHHC17-12:1