Transcript: lnc-ZDHHC17-20:2

Basic information

LNCipedia transcript ID: lnc-ZDHHC17-20:2 
LNCipedia gene ID: lnc-ZDHHC17-20
Location (hg38): chr12:77775783-77783954
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 790 bp
Exons: 3
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT029615; FPKM1_group_6673_transcript_2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -128.0917 non-coding 
CPAT coding probability 18.31% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZDHHC17-20:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NAV3-1:12
4.0 lnc-NAV3-1:12
4.1 lnc-NAV3-1:12
5.0 lnc-NAV3-1:12
5.1 lnc-SYT1-19:12
5.2 lnc-ZDHHC17-20:2