Transcript: lnc-ZDHHC17-20:5

Basic information

LNCipedia transcript ID: lnc-ZDHHC17-20:5 
LNCipedia gene ID: lnc-ZDHHC17-20
Location (hg38): chr12:77777495-77783554
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 561 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT029618
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -28.9042 non-coding 
CPAT coding probability 18.50% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZDHHC17-20:5 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NAV3-1:13
4.0 lnc-NAV3-1:13
4.1 lnc-NAV3-1:13
5.0 lnc-NAV3-1:13
5.1 lnc-SYT1-19:15
5.2 lnc-ZDHHC17-20:5