Transcript: lnc-ZDHHC6-1:5

Basic information

LNCipedia transcript ID: lnc-ZDHHC6-1:5 
LNCipedia gene ID: lnc-ZDHHC6-1
Ensembl Gene ID: ENSG00000232934
Ensembl Transcript ID: ENST00000631085
Location (hg38): chr10:112408900-112425589
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 525 bp
Exons: 5
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000631085.2
Alternative gene names: ENSG00000232934.7; RP11-324O2.3; AL157786.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -128.4176 non-coding 
CPAT coding probability 16.49% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZDHHC6-1:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-ZDHHC6-1:5
4.1 lnc-ZDHHC6-1:5
5.0 lnc-ZDHHC6-1:5
5.1 lnc-BBIP1-21:1
5.2 lnc-ZDHHC6-1:5