Transcript: lnc-ZEB1-1:5

Basic information

LNCipedia transcript ID: lnc-ZEB1-1:5 
LNCipedia gene ID: lnc-ZEB1-1
Location (hg38): chr10:31602670-31610126
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 5749 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000223834.2|MICT00000039437.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 8.0112 non-coding 
CPAT coding probability 31.85% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZEB1-1:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ZEB1-1:5
5.0 lnc-ZEB1-1:5
5.1 lnc-NPY4R2-187:3
5.2 lnc-ZEB1-1:5