Transcript: lnc-ZFAT-10:1

Basic information

LNCipedia transcript ID: lnc-ZFAT-10:1 
LNCipedia gene ID: lnc-ZFAT-10
Location (hg38): chr8:135625185-135625981
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 797 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT129291
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 2 coding 
Peptide Confidence Reading frame
AVNVYSTSVTSDNLSR 100% sense-1
LTVEDLEKER 100% sense-2
Lee translation initiation sites 0 non-coding 
PhyloCSF score 4.8809 non-coding 
CPAT coding probability 19.63% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ZFAT-10:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZFAT-10:1
4.0 lnc-ZFAT-10:1
4.1 lnc-ZFAT-10:1
5.0 lnc-ZFAT-10:1
5.1 lnc-SLURP2-62:1
5.2 lnc-ZFAT-10:1