Transcript: lnc-ZFHX3-27:15

Basic information

LNCipedia transcript ID: lnc-ZFHX3-27:15 
LNCipedia gene ID: lnc-ZFHX3-27
Ensembl Gene ID: ENSG00000261404
Ensembl Transcript ID: ENST00000641872
Location (hg38): chr16:73948811-74181935
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1680 bp
Exons: 5
Sources: Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000641872.1
Alternative gene names: ENSG00000261404.6; AC138627.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 13.0928 non-coding 
CPAT coding probability 0.43% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZFHX3-27:15 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-MLKL-27:15
5.1 lnc-MLKL-27:15
5.2 lnc-ZFHX3-27:15