Transcript: lnc-ZFHX3-27:18

Basic information

LNCipedia transcript ID: lnc-ZFHX3-27:18 
LNCipedia gene ID: lnc-ZFHX3-27
Location (hg38): chr16:73948589-73994706
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1382 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00024726; NONHSAT143651
Alternative gene names: XLOC_012006; linc-ZFHX3-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -16.2326 non-coding 
CPAT coding probability 0.92% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZFHX3-27:18 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CLEC18B-3:1
3.1 lnc-CLEC18B-4:1
4.0 lnc-CLEC18B-4:1
4.1 lnc-CLEC18B-4:1
5.0 lnc-CLEC18B-4:1
5.1 lnc-MLKL-27:18
5.2 lnc-ZFHX3-27:18