Transcript: lnc-ZFP36L2-1:2

Basic information

LNCipedia transcript ID: lnc-ZFP36L2-1:2 
LNCipedia gene ID: lnc-ZFP36L2-1
Location (hg38): chr2:43193166-43197513
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4348 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000048286.1|HBMT00000803360.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 56.6273 non-coding 
CPAT coding probability 2.08% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ZFP36L2-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ZFP36L2-1:2
5.0 lnc-ZFP36L2-1:2
5.1 lnc-ATP6V1E2-39:2
5.2 lnc-ZFP36L2-1:2