Transcript: lnc-ZFP90-3:2

Basic information

LNCipedia transcript ID: lnc-ZFP90-3:2 
LNCipedia gene ID: lnc-ZFP90-3
Ensembl Gene ID: ENSG00000274698
Ensembl Transcript ID: ENST00000619354
Location (hg38): chr16:68450283-68452318
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2036 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000619354.1
Alternative gene names: ENSG00000274698.1; RP11-71L14.4; AC099521.2; AC099521.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -16.628 non-coding 
CPAT coding probability 1.66% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZFP90-3:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-ZFP90-3:2
4.1 lnc-ZFP90-3:2
5.0 lnc-ZFP90-3:2
5.1 lnc-PRMT7-3:6
5.2 lnc-ZFP90-3:2