Transcript: lnc-ZG16-1:1

Basic information

LNCipedia transcript ID: lnc-ZG16-1:1 
LNCipedia gene ID: lnc-ZG16-1
Location (hg38): chr16:29781925-29782973
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1049 bp
Exons: 1
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000572964.1; AC009133.21-001; OTTHUMT00000438221.1; NONHSAT141627
Alternative gene names: ENSG00000262756.1; AC009133.21; OTTHUMG00000177646.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 5.5484 non-coding 
CPAT coding probability 9.71% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZG16-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZG16-1:1
4.0 lnc-ZG16-1:1
4.1 lnc-ZG16-1:1
5.0 lnc-ZG16-1:1
5.1 lnc-PRRT2-6:1
5.2 lnc-ZG16-1:1