Transcript: lnc-ZGLP1-6:1

Basic information

LNCipedia transcript ID: lnc-ZGLP1-6:1 
LNCipedia gene ID: lnc-ZGLP1-6
Location (hg38): chr19:10221435-10223194
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1760 bp
Exons: 1
Sources: NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: NONHSAT061038; ENST00000317726.4
Alternative gene names: ENSG00000175898.4; CTD-2369P2.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 35.802 non-coding 
CPAT coding probability 5.34% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZGLP1-6:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DNMT1-2:1
4.0 lnc-DNMT1-2:1
4.1 lnc-DNMT1-2:1
5.0 lnc-DNMT1-2:1
5.1 lnc-EIF3G-7:1
5.2 lnc-ZGLP1-6:1