Transcript: lnc-ZGRF1-2:4

Basic information

LNCipedia transcript ID: lnc-ZGRF1-2:4 
LNCipedia gene ID: lnc-ZGRF1-2
Location (hg38): chr4:112693448-112693792
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 345 bp
Exons: 1
Sources: Gencode v13; Ensembl release 68 - Jul 2012
Alternative transcript names: ENST00000536866.1; RP11-148B6.2-201
Alternative gene names: ENSG00000250046.2; RP11-148B6.2; OTTHUMG00000161567.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -109.9378 non-coding 
CPAT coding probability 79.95% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ZGRF1-2:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C4orf21-2:2
4.0 lnc-C4orf21-2:2
4.1 lnc-C4orf21-2:2
5.0 lnc-C4orf21-2:2
5.1 lnc-NEUROG2-3:4
5.2 lnc-ZGRF1-2:4