Transcript: lnc-ZIC1-5:7

Basic information

LNCipedia transcript ID: lnc-ZIC1-5:7 
LNCipedia gene ID: lnc-ZIC1-5
Location (hg38): chr3:147940005-147941114
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 320 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000239922.1|MICT00000252056.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -164.3325 non-coding 
CPAT coding probability 0.78% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZIC1-5:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ZIC1-5:7
5.0 lnc-ZIC1-5:7
5.1 lnc-ZIC1-5:7
5.2 lnc-ZIC1-5:7