Transcript: lnc-ZKSCAN2-6:3

Basic information

LNCipedia transcript ID: lnc-ZKSCAN2-6:3 
LNCipedia gene ID: lnc-ZKSCAN2-6
Location (hg38): chr16:24919393-24936827
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2847 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT141179
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 3525.6733 coding 
CPAT coding probability 99.87% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ZKSCAN2-6:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ARHGAP17-6:2
4.0 lnc-ARHGAP17-6:2
4.1 lnc-ARHGAP17-6:2
5.0 lnc-ARHGAP17-6:2
5.1 lnc-SULT1A2-138:2
5.2 lnc-ZKSCAN2-6:3