Transcript: lnc-ZMYND19-3:2

Basic information

LNCipedia transcript ID: lnc-ZMYND19-3:2 
LNCipedia gene ID: lnc-ZMYND19-3
Location (hg38): chr9:137867913-137877297
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1453 bp
Exons: 4
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00016518; NONHSAT135757
Alternative gene names: XLOC_007904; linc-C9orf37-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -34.2557 non-coding 
CPAT coding probability 32.48% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZMYND19-3:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AL772363.1-1:1
3.1 lnc-AL772363.1-1:1
4.0 lnc-AL772363.1-1:1
4.1 lnc-AL772363.1-1:1
5.0 lnc-AL772363.1-1:1
5.1 lnc-FAM166A-16:2
5.2 lnc-ZMYND19-3:2