Transcript: lnc-ZNF131-1:26

Basic information

LNCipedia transcript ID: lnc-ZNF131-1:26 
LNCipedia gene ID: lnc-ZNF131-1
Location (hg38): chr5:43054729-43055305
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 577 bp
Exons: 1
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT101272; FPKM1_group_25294_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 0.1258 non-coding 
CPAT coding probability 3.54% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNF131-1:26 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZNF131-6:1
4.0 lnc-ZNF131-5:4
4.1 lnc-ZNF131-1:26
5.0 lnc-ZNF131-1:26
5.1 lnc-CARD6-41:26
5.2 lnc-ZNF131-1:26