Transcript: lnc-ZNF131-2:10

Basic information

LNCipedia transcript ID: lnc-ZNF131-2:10 
LNCipedia gene ID: lnc-ZNF131-2
Location (hg38): chr5:43066090-43100309
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 3235 bp
Exons: 3
Sources: Broad Institute
Alternative transcript names: TCONS_00009945
Alternative gene names: XLOC_004366; linc-ZNF131-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -3.1715 non-coding 
CPAT coding probability 33.87% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNF131-2:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AC114947.1.1-1:5
3.1 lnc-AC114947.1.1-2:5
4.0 lnc-ZNF131-2:10
4.1 lnc-ZNF131-2:10
5.0 lnc-ZNF131-2:10
5.1 lnc-CARD6-42:6
5.2 lnc-ZNF131-2:10