Transcript: lnc-ZNF131-2:6

Basic information

LNCipedia transcript ID: lnc-ZNF131-2:6 
LNCipedia gene ID: lnc-ZNF131-2
Location (hg38): chr5:43065159-43068297
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2804 bp
Exons: 2
Sources: Broad Institute
Alternative transcript names: TCONS_00009942
Alternative gene names: XLOC_004366; linc-ZNF131-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 3.3788 non-coding 
CPAT coding probability 34.41% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNF131-2:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AC114947.1.1-1:2
3.1 lnc-AC114947.1.1-2:2
4.0 lnc-ZNF131-2:6
4.1 lnc-ZNF131-2:6
5.0 lnc-ZNF131-2:6
5.1 lnc-CARD6-42:2
5.2 lnc-ZNF131-2:6