Transcript: lnc-ZNF136-1:10

Basic information

LNCipedia transcript ID: lnc-ZNF136-1:10 
LNCipedia gene ID: lnc-ZNF136-1
Location (hg38): chr19:12195088-12207454
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 411 bp
Exons: 3
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015
Alternative transcript names: NONHSAT146959; ENST00000451691.2
Alternative gene names: ENSG00000234773.2; CTD-2666L21.1; ENSG00000234773.6


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -36.8505 non-coding 
CPAT coding probability 1.81% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNF136-1:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZNF136-1:10
4.0 lnc-ZNF136-1:10
4.1 lnc-ZNF136-1:10
5.0 lnc-ZNF136-1:10
5.1 lnc-ZNF763-4:16
5.2 lnc-ZNF136-1:10