Transcript: lnc-ZNF217-2:2

Basic information

LNCipedia transcript ID: lnc-ZNF217-2:2 
LNCipedia gene ID: lnc-ZNF217-2
Location (hg38): chr20:53397661-53401234
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2929 bp
Exons: 2
Sources: Biogazelle lncRNA chip; Ensembl release 64 - Sep 2011
Alternative transcript names: ENST00000436286
Alternative gene names: ENSG00000231703; RP4-669H2.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 11.278 non-coding 
CPAT coding probability 10.02% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNF217-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ZNF217-1:1
3.1 lnc-ZNF217-2:2
4.0 lnc-ZNF217-2:2
4.1 lnc-ZNF217-2:2
5.0 lnc-ZNF217-2:2
5.1 lnc-SPATA2-54:4
5.2 lnc-ZNF217-2:2