Transcript: lnc-ZNF23-1:1

Basic information

LNCipedia transcript ID: lnc-ZNF23-1:1 
LNCipedia gene ID: lnc-ZNF23-1
Location (hg38): chr16:71447597-71452649
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 5053 bp
Exons: 1
Sources: Gencode v13; Ensembl release 68 - Jul 2012
Alternative transcript names: ENST00000576258.1; RP11-510M2.10-001; OTTHUMT00000440452.1
Alternative gene names: ENSG00000262086.1; RP11-510M2.10; OTTHUMG00000178085.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 3798.3014 coding 
CPAT coding probability 100.00% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ZNF23-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZNF23-1:1
4.0 lnc-ZNF23-1:1
4.1 lnc-ZNF23-1:1
5.0 lnc-ZNF23-1:1
5.1 lnc-ZNF19-3:1
5.2 lnc-ZNF23-1:1