Transcript: lnc-ZNF236-11:2

Basic information

LNCipedia transcript ID: lnc-ZNF236-11:2 
LNCipedia gene ID: lnc-ZNF236-11
Ensembl Gene ID: ENSG00000266014
Ensembl Transcript ID: ENST00000577258
Location (hg38): chr18:76247725-76251388
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 391 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000577258.1; RP11-94B19.2-001; OTTHUMT00000444928.1; NONHSAT059920
Alternative gene names: ENSG00000266014.1; RP11-94B19.2; OTTHUMG00000179134.1; AC103808.4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -131.8247 non-coding 
CPAT coding probability 3.33% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNF236-11:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-17M16.1.1-6:2
4.0 lnc-RP11-17M16.1.1-6:2
4.1 lnc-RP11-17M16.1.1-6:2
5.0 lnc-RP11-17M16.1.1-6:2
5.1 lnc-KCNG2-36:2
5.2 lnc-ZNF236-11:2