Transcript: lnc-ZNF236-11:3

Basic information

LNCipedia transcript ID: lnc-ZNF236-11:3 
LNCipedia gene ID: lnc-ZNF236-11
Location (hg38): chr18:76247813-76260044
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 901 bp
Exons: 6
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00026374; NONHSAT059921
Alternative gene names: XLOC_012725; linc-ZNF236-5


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -131.8247 non-coding 
CPAT coding probability 22.56% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNF236-11:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RP11-17M16.1.1-4:2
3.1 lnc-RP11-17M16.1.1-6:3
4.0 lnc-RP11-17M16.1.1-6:3
4.1 lnc-RP11-17M16.1.1-6:3
5.0 lnc-RP11-17M16.1.1-6:3
5.1 lnc-KCNG2-36:3
5.2 lnc-ZNF236-11:3