Transcript: lnc-ZNF236-6:2

Basic information

LNCipedia transcript ID: lnc-ZNF236-6:2 
LNCipedia gene ID: lnc-ZNF236-6
Location (hg38): chr18:77087545-77093410
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1314 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000036634.1|ENCT00000194734.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 13.0758 non-coding 
CPAT coding probability 6.52% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNF236-6:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ZNF236-6:2
5.0 lnc-ZNF236-6:2
5.1 lnc-KCNG2-27:1
5.2 lnc-ZNF236-6:2