Transcript: lnc-ZNF236-8:7

Basic information

LNCipedia transcript ID: lnc-ZNF236-8:7 
LNCipedia gene ID: lnc-ZNF236-8
Location (hg38): chr18:76491652-76493531
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 813 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000581996.1; RP11-17M16.2-001; OTTHUMT00000444934.1; NONHSAT059931
Alternative gene names: ENSG00000265778.1; RP11-17M16.2; OTTHUMG00000179140.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -41.2287 non-coding 
CPAT coding probability 6.84% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNF236-8:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-17M16.1.1-1:1
4.0 lnc-RP11-17M16.1.1-1:1
4.1 lnc-RP11-17M16.1.1-1:1
5.0 lnc-RP11-17M16.1.1-1:1
5.1 lnc-KCNG2-34:7
5.2 lnc-ZNF236-8:7