Transcript: lnc-ZNF280B-46:1

Basic information

LNCipedia transcript ID: lnc-ZNF280B-46:1 
LNCipedia gene ID: lnc-ZNF280B-46
Ensembl Gene ID: ENSG00000274422
Ensembl Transcript ID: ENST00000610778
Location (hg38): chr22:22283928-22287220
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3293 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000610778.1
Alternative gene names: ENSG00000274422.1; LL22NC03-2H8.5; AC245060.5


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 4.9188 non-coding 
CPAT coding probability 0.05% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNF280B-46:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-SCARF2-46:1
5.1 lnc-SCARF2-46:1
5.2 lnc-ZNF280B-46:1