Transcript: lnc-ZNF316-3:10

Basic information

LNCipedia transcript ID: lnc-ZNF316-3:10 
LNCipedia gene ID: lnc-ZNF316-3
Location (hg38): chr7:6677455-6678378
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 924 bp
Exons: 1
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT119057; FPKM1_group_29051_transcript_4
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -46.4856 non-coding 
CPAT coding probability 0.66% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNF316-3:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC073343.1-3:1
4.0 lnc-AC073343.1-3:1
4.1 lnc-AC073343.1-1:12
5.0 lnc-AC073343.1-1:12
5.1 lnc-SLC29A4-27:10
5.2 lnc-ZNF316-3:10