Transcript: lnc-ZNF316-3:11

Basic information

LNCipedia transcript ID: lnc-ZNF316-3:11 
LNCipedia gene ID: lnc-ZNF316-3
Location (hg38): chr7:6707073-6711502
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2115 bp
Exons: 3
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT119061; FPKM1_group_29054_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -25.7641 non-coding 
CPAT coding probability 1.00% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNF316-3:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC073343.1-1:6
4.0 lnc-AC073343.1-1:6
4.1 lnc-AC073343.1-1:6
5.0 lnc-AC073343.1-1:6
5.1 lnc-SLC29A4-27:11
5.2 lnc-ZNF316-3:11