Transcript: lnc-ZNF316-3:6

Basic information

LNCipedia transcript ID: lnc-ZNF316-3:6 
LNCipedia gene ID: lnc-ZNF316-3
Location (hg38): chr7:6663974-6665521
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 548 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000228010.1|ENST00000413182.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -128.5582 non-coding 
CPAT coding probability 0.31% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNF316-3:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-AC073343.1-1:8
5.0 lnc-AC073343.1-1:8
5.1 lnc-SLC29A4-27:6
5.2 lnc-ZNF316-3:6