Transcript: lnc-ZNF37A-4:1

Basic information

LNCipedia transcript ID: lnc-ZNF37A-4:1 
LNCipedia gene ID: lnc-ZNF37A-4
Location (hg38): chr10:38453181-38466383
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 934 bp
Exons: 3
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000428915; ENST00000428915.1; RP11-291L22.4-002; OTTHUMT00000047653.2; NONHSAT012829
Alternative gene names: ENSG00000203496; RP11-291L22.4; ENSG00000203496.3; OTTHUMG00000017996.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 11.0904 non-coding 
CPAT coding probability 26.55% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNF37A-4:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ZNF37A-4:1
3.1 lnc-ZNF37A-4:1
4.0 lnc-ZNF37A-4:1
4.1 lnc-ZNF37A-4:1
5.0 lnc-ZNF37A-4:1
5.1 lnc-NPY4R2-116:1
5.2 lnc-ZNF37A-4:1