Transcript: lnc-ZNF37A-4:2

Basic information

LNCipedia transcript ID: lnc-ZNF37A-4:2 
LNCipedia gene ID: lnc-ZNF37A-4
Ensembl Gene ID: ENSG00000203496
Ensembl Transcript ID: ENST00000428915
Location (hg38): chr10:38453181-38466176
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 727 bp
Exons: 3
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000428915.2; ENST00000428915.6
Alternative gene names: ENSG00000203496.4; RP11-291L22.4; ENSG00000203496.8; ENSG00000203496.9; AL133216.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 11.0904 non-coding 
CPAT coding probability 26.78% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNF37A-4:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZNF37A-4:2
4.0 lnc-ZNF37A-4:2
4.1 lnc-ZNF37A-4:2
5.0 lnc-ZNF37A-4:2
5.1 lnc-NPY4R2-116:2
5.2 lnc-ZNF37A-4:2