Transcript: lnc-ZNF382-5:3

Basic information

LNCipedia transcript ID: lnc-ZNF382-5:3 
LNCipedia gene ID: lnc-ZNF382-5
Ensembl Gene ID: ENSG00000267309
Ensembl Transcript ID: ENST00000592087
Location (hg38): chr19:36489649-36491040
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1392 bp
Exons: 1
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000592087.1
Alternative gene names: ENSG00000267309.1; CTD-2630F21.1; AC092295.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 56.2542 non-coding 
CPAT coding probability 85.89% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ZNF382-5:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC092295.7.1-5:2
4.0 lnc-AC092295.7.1-5:2
4.1 lnc-AC092295.7.1-5:2
5.0 lnc-AC092295.7.1-5:2
5.1 lnc-ZNF345-17:3
5.2 lnc-ZNF382-5:3