Transcript: lnc-ZNF45-2:3

Basic information

LNCipedia transcript ID: lnc-ZNF45-2:3 
LNCipedia gene ID: lnc-ZNF45-2
Ensembl Gene ID: ENSG00000266921
Ensembl Transcript ID: ENST00000589021
Location (hg38): chr19:43996899-44002833
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2176 bp
Exons: 3
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT066651; ENST00000589021.1
Alternative gene names: ENSG00000266921.1; RP11-15A1.7; AC006213.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -12.5398 non-coding 
CPAT coding probability 1.45% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNF45-2:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZNF45-2:3
4.0 lnc-ZNF45-2:3
4.1 lnc-ZNF45-2:3
5.0 lnc-ZNF45-2:3
5.1 lnc-GPR4-39:4
5.2 lnc-ZNF45-2:3