Transcript: lnc-ZNF473-4:1

Basic information

LNCipedia transcript ID: lnc-ZNF473-4:1 
LNCipedia gene ID: lnc-ZNF473-4
Location (hg38): chr19:49984651-49987704
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2900 bp
Exons: 2
Sources: Biogazelle lncRNA chip
Alternative transcript names: ENST00000505832
Alternative gene names: ENSG00000250401


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -2.49 non-coding 
CPAT coding probability 5.53% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNF473-4:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-SIGLEC16-1:1
3.1 lnc-SIGLEC16-1:1
4.0 lnc-SIGLEC16-1:1
4.1 lnc-SIGLEC16-1:1
5.0 lnc-SIGLEC16-1:1
5.1 lnc-PRRG2-22:1
5.2 lnc-ZNF473-4:1