Transcript: lnc-ZNF485-68:10

Basic information

LNCipedia transcript ID: lnc-ZNF485-68:10 
LNCipedia gene ID: lnc-ZNF485-68
Location (hg38): chr10:43859462-43861902
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 923 bp
Exons: 2
Sources: Broad Institute
Alternative transcript names: TCONS_00018182
Alternative gene names: XLOC_008473; linc-TMEM72-2; bA168P8.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -142.4617 non-coding 
CPAT coding probability 3.72% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNF485-68:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-C10orf136-1:2
3.1 lnc-C10orf136-1:2
4.0 lnc-C10orf136-1:2
4.1 LINC00619:10
5.0 LINC00619:10
5.1 lnc-NPY4R2-68:10
5.2 lnc-ZNF485-68:10