Transcript: lnc-ZNF485-68:29

Basic information

LNCipedia transcript ID: lnc-ZNF485-68:29 
LNCipedia gene ID: lnc-ZNF485-68
Location (hg38): chr10:43972155-43981116
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 707 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00018724; NONHSAT013022
Alternative gene names: XLOC_008473; linc-TMEM72-2; bA168P8.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -267.9925 non-coding 
CPAT coding probability 10.46% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNF485-68:29 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-C10orf136-1:15
3.1 lnc-C10orf136-1:15
4.0 lnc-C10orf136-1:15
4.1 LINC00619:26
5.0 LINC00619:26
5.1 lnc-NPY4R2-68:29
5.2 lnc-ZNF485-68:29