Transcript: lnc-ZNF486-12:1

Basic information

LNCipedia transcript ID: lnc-ZNF486-12:1 
LNCipedia gene ID: lnc-ZNF486-12
Location (hg38): chr19:20158880-20161819
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2940 bp
Exons: 1
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA1661:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 8.2362 non-coding 
CPAT coding probability 5.96% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNF486-12:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-ZNF486-12:1
4.1 lnc-ZNF486-12:1
5.0 lnc-ZNF486-12:1
5.1 lnc-ZNF430-29:1
5.2 lnc-ZNF486-12:1