Transcript: lnc-ZNF487-1:8

Basic information

LNCipedia transcript ID: lnc-ZNF487-1:8 
LNCipedia gene ID: lnc-ZNF487-1
Ensembl Gene ID: ENSG00000230555
Ensembl Transcript ID: ENST00000442526
Location (hg38): chr10:43420738-43422100
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 760 bp
Exons: 2
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000442526.2
Alternative gene names: ENSG00000230555.2; RP11-517P14.2; AL450326.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 18.7414 non-coding 
CPAT coding probability 4.53% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNF487-1:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZNF487P-1:4
4.0 lnc-ZNF487P-1:4
4.1 lnc-ZNF487P-1:4
5.0 lnc-ZNF487P-1:4
5.1 lnc-NPY4R2-80:8
5.2 lnc-ZNF487-1:8