Transcript: lnc-ZNF487-4:1

Basic information

LNCipedia transcript ID: lnc-ZNF487-4:1 
LNCipedia gene ID: lnc-ZNF487-4
Location (hg38): chr10:43408934-43416968
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 8035 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000113439.1|ENCT00000045409.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 35.8982 non-coding 
CPAT coding probability 1.70% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNF487-4:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ZNF487P-4:2
5.0 lnc-ZNF487P-4:2
5.1 lnc-NPY4R2-81:1
5.2 lnc-ZNF487-4:1