Transcript: lnc-ZNF500-1:2

Basic information

LNCipedia transcript ID: lnc-ZNF500-1:2 
LNCipedia gene ID: lnc-ZNF500-1
Ensembl Gene ID: ENSG00000266994
Ensembl Transcript ID: ENST00000588099
Location (hg38): chr16:4730115-4752565
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 556 bp
Exons: 5
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT148163; ENST00000588099.1
Alternative gene names: ENSG00000266994.1; RP11-127I20.7; AC020663.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -188.056 non-coding 
CPAT coding probability 17.74% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNF500-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ANKS3-1:2
4.0 lnc-ZNF500-1:2
4.1 lnc-ZNF500-1:2
5.0 lnc-ZNF500-1:2
5.1 lnc-SEPT12-5:2
5.2 lnc-ZNF500-1:2