Transcript: lnc-ZNF516-4:8

Basic information

LNCipedia transcript ID: lnc-ZNF516-4:8 
LNCipedia gene ID: lnc-ZNF516-4
Location (hg38): chr18:76211311-76255256
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 8921 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000265717.1|MICT00000164289.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 20.5885 non-coding 
CPAT coding probability 16.29% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNF516-4:8 no no no no

Available literature

  1. Di Salvo (2015), Right ventricular long noncoding RNA expression in human heart failure., Pulm Circ


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ZNF516-4:8
5.0 lnc-ZNF516-4:8
5.1 lnc-PQLC1-32:4
5.2 lnc-ZNF516-4:8