Transcript: lnc-ZNF536-9:2

Basic information

LNCipedia transcript ID: lnc-ZNF536-9:2 
LNCipedia gene ID: lnc-ZNF536-9
Ensembl Gene ID: ENSG00000267599
Ensembl Transcript ID: ENST00000587779
Location (hg38): chr19:31465653-31466431
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 293 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT064144; ENST00000587779.1
Alternative gene names: ENSG00000267599.1; CTD-2050I18.2; AC008794.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -187.8935 non-coding 
CPAT coding probability 4.62% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNF536-9:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZNF507-9:1
4.0 lnc-ZNF507-9:1
4.1 lnc-ZNF507-9:1
5.0 lnc-ZNF507-9:1
5.1 lnc-GPI-51:1
5.2 lnc-ZNF536-9:2