Transcript: lnc-ZNF567-2:5

Basic information

LNCipedia transcript ID: lnc-ZNF567-2:5 
LNCipedia gene ID: lnc-ZNF567-2
Ensembl Gene ID: ENSG00000267260
Ensembl Transcript ID: ENST00000590750
Location (hg38): chr19:36773153-36777078
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1850 bp
Exons: 2
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000590750.1
Alternative gene names: ENSG00000267260.1; CTD-2162K18.4; AC020928.1; AC020928.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 36.731 non-coding 
CPAT coding probability 5.07% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNF567-2:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-ZNF567-2:5
4.1 lnc-ZNF567-2:5
5.0 lnc-ZNF567-2:5
5.1 lnc-ZNF345-5:2
5.2 lnc-ZNF567-2:5